30 research outputs found
Selective Binding of Monovalent Cations to the Stacking G-Quartet Structure Formed by Guanosine 5‘-Monophosphate: A Solid-State NMR Study
We report a solid-state multinuclear (23Na, 15N, 13C, and 31P) NMR study on the relative affinity
of monovalent cations for a stacking G-quartet structure formed by guanosine 5‘-monophosphate (5‘-GMP)
self-association at pH 8. Two major types of cations are bound to the 5‘-GMP structure: one at the surface
and the other within the channel cavity between two G-quartets. The channel cation is coordinated to eight
carbonyl oxygen atoms from the guanine bases, whereas the surface cation is close to the phosphate
group and likely to be only partially hydrated. On the basis of solid-state 23Na NMR results from a series
of ion titration experiments, we have obtained quantitative thermodynamic parameters concerning the relative
cation binding affinity for each of the two major binding sites. For the channel cavity site, the values of the
free energy difference (ΔG° at 25 °C) for ion competition between M+ and Na+ ions are K+ (−1.9 kcal
mol-1), NH4+ (−1.8 kcal mol-1), Rb+ (−0.3 kcal mol-1), and Cs+ (1.8 kcal mol-1). For the surface site, the
values ΔG° are K+ (2.5 kcal mol-1), NH4+ (−1.3 kcal mol-1), Rb+ (1.1 kcal mol-1), and Cs+ (0.9 kcal mol-1).
Solid-state NMR data suggest that the affinity of monovalent cations for the 5‘-GMP structure follows the
order NH4+ > Na+ > Cs+ > Rb+ > K+ at the surface site and K+ > NH4+ > Rb+ > Na+ > Cs+ > Li+ at the
channel cavity site. We have found that the cation-induced stability of a 5‘-GMP structure is determined
only by the affinity of monovalent cations for the channel site and that the binding of monovalent cations
to phosphate groups plays no role in 5‘-GMP self-ordered structure. We have demonstrated that solid-state 23Na and 15N NMR can be used simultaneously to provide mutually complementary information about
competitive binding between Na+ and NH4+ ions
A High-Resolution <sup>43</sup>Ca Solid-State NMR Study of the Calcium Sites of Hydroxyapatite
High resolution 43Ca solid-state NMR studies of hydroxyapatite (Ca10(PO4)6(OH)2) were performed at 14.1 T. The two crystallographically distinct calcium sites were unequivocally resolved by a triple-quantum magic angle spinning experiment, and the unambiguous assignment of the signals was possible using 1H-43Ca rotational echo double resonance and 1H-43Ca cross polarization magic angle spinning experiments
In Situ NMR Insights into the Electrochemical Reaction of Cu<sub>3</sub>P Electrodes in Lithium Batteries
This study reports a multinuclei
in situ (real-time) NMR spectroscopic
characterization of the electrochemical reactions of a negative Cu<sub>3</sub>P electrode toward lithium. Taking advantage of the different
nuclear spin characteristics, we have obtained real-time <sup>31</sup>P and <sup>7</sup>Li NMR data for a comprehensive understanding of
the electrochemical mechanism during the discharge and charge processes
of a lithium battery. The large NMR chemical shift span of <sup>31</sup>P facilitates the observation of the chemical evolutions of different
lithiated and delithiated Li<sub><i>x</i></sub>Cu<sub>3–<i>x</i></sub>P phases, whereas the quadrupolar line features in <sup>7</sup>Li enable identification of asymmetric Li sites.
These combined NMR data offer an unambiguous identification of four
distinct Li<sub><i>x</i></sub>Cu<sub>3–<i>x</i></sub>P phases, Cu<sub>3</sub>P, Li<sub>0.2</sub>Cu<sub>2.8</sub>P, Li<sub>2</sub>CuP, and Li<sub>3</sub>P, and the characterization
of their involvement in the electrochemical reactions. The NMR data
led us to propose a delithiation process involving the intercalation
of metallic Cu<sup>0</sup> atomic aggregates into the Li<sub>2</sub>CuP structure to form a Cu<sup>0</sup>-Li<sub>2–<i>x</i></sub>Cu<sub>1+<i>x</i></sub>P phase. This process might
be responsible for the poor capacity retention in Cu<sub>3</sub>P
lithium batteries when cycled to a low voltage
Solid-State <sup>25</sup>Mg NMR Spectroscopic and Computational Studies of Organic Compounds. Square-Pyramidal Magnesium(II) Ions in Aqua(magnesium) Phthalocyanine and Chlorophyll <i>a</i>
We report a solid-state 25Mg NMR spectroscopic study of two magnesium-containing organic compounds:
monopyridinated aqua(magnesium) phthalocyanine (MgPc·H2O·Py) and chlorophyll a (Chla). Each of these
compounds contains a Mg(II) ion coordinating to four nitrogen atoms and a water molecule in a square-pyramidal geometry. Solid-state 25Mg NMR spectra for MgPc·H2O·Py were obtained at 11.7 T (500 MHz
for 1H) for a 25Mg-enriched sample (99.1% 25Mg atom) using both Hahn-echo and quadrupole Carr−Purcell
Meiboom−Gill (QCPMG) pulse sequences. Solid-state 25Mg NMR spectra for Chla were recorded at 25Mg
natural abundance (10.1%) at 19.6 T (830 MHz for 1H). The 25Mg quadrupole parameters were determined
from spectral analyses: MgPc·H2O·Py, CQ = 13.0 ± 0.1 MHz and ηQ = 0.00 ± 0.05; Chla, CQ = 12.9 ±
0.1 MHz and ηQ = 1.00 ± 0.05. This work represents the first time that Mg(II) ions in a square-pyramidal
geometry have been characterized by solid-state 25Mg NMR spectroscopy. Extensive quantum mechanical
calculations for electric-field-gradient (EFG) and chemical shielding tensors were performed at restricted
Hartee−Fock (RHF), density functional theory (DFT), and second-order Møller−Plesset perturbation theory
(MP2) levels for both compounds. Computed 25Mg nuclear quadrupole coupling constants at the RHF and
MP2 levels show a reasonable basis-set convergence at the cc-pV5Z basis set (within 7% of the experimental
value); however, B3LYP results display a drastic divergence beyond the cc-pVTZ basis set. A new crystal
structure for MgPc·H2O·Py is also reported
Solid-State <sup>25</sup>Mg NMR Spectroscopic and Computational Studies of Organic Compounds. Square-Pyramidal Magnesium(II) Ions in Aqua(magnesium) Phthalocyanine and Chlorophyll <i>a</i>
We report a solid-state 25Mg NMR spectroscopic study of two magnesium-containing organic compounds:
monopyridinated aqua(magnesium) phthalocyanine (MgPc·H2O·Py) and chlorophyll a (Chla). Each of these
compounds contains a Mg(II) ion coordinating to four nitrogen atoms and a water molecule in a square-pyramidal geometry. Solid-state 25Mg NMR spectra for MgPc·H2O·Py were obtained at 11.7 T (500 MHz
for 1H) for a 25Mg-enriched sample (99.1% 25Mg atom) using both Hahn-echo and quadrupole Carr−Purcell
Meiboom−Gill (QCPMG) pulse sequences. Solid-state 25Mg NMR spectra for Chla were recorded at 25Mg
natural abundance (10.1%) at 19.6 T (830 MHz for 1H). The 25Mg quadrupole parameters were determined
from spectral analyses: MgPc·H2O·Py, CQ = 13.0 ± 0.1 MHz and ηQ = 0.00 ± 0.05; Chla, CQ = 12.9 ±
0.1 MHz and ηQ = 1.00 ± 0.05. This work represents the first time that Mg(II) ions in a square-pyramidal
geometry have been characterized by solid-state 25Mg NMR spectroscopy. Extensive quantum mechanical
calculations for electric-field-gradient (EFG) and chemical shielding tensors were performed at restricted
Hartee−Fock (RHF), density functional theory (DFT), and second-order Møller−Plesset perturbation theory
(MP2) levels for both compounds. Computed 25Mg nuclear quadrupole coupling constants at the RHF and
MP2 levels show a reasonable basis-set convergence at the cc-pV5Z basis set (within 7% of the experimental
value); however, B3LYP results display a drastic divergence beyond the cc-pVTZ basis set. A new crystal
structure for MgPc·H2O·Py is also reported
Operando Magnetic Resonance Imaging Reveals Phase Transitions Driven by Nonuniform Cathode Lithiation in Li-Ion Pouch Cells
Li-ion
cells based on layered transition metal oxides (LTMO) demonstrate
the best overall performance to date. A detailed understanding of
ion transport and charge storage mechanisms in these cathode materials
is key to improved design, performance, and safety of cells. The magnetism
of LTMO-based materials depends on the concentration and the type
of the intercalant. This phenomenon provides a source of sensitive
magnetic resonance imaging (MRI) contrast for studies of Li-ion cell
function and failure mechanisms. Surface-scan MRI is a nondestructive
operando technique designed for artifact-free mapping of strongly
inhomogeneous magnetic fields near various portable devices and battery
cells. Recent experiments revealed nonuniform distributions of current
density and magnetic susceptibility in common Li-ion pouch cells.
Further analysis of the surface-scan MRI data suggests the coexistence
of several magnetic phases and the presence of transient Li concentration
gradients in the cathode. These hypotheses are validated herein through
the observation of propagating magnetic susceptibility fronts in LixCoO2 cathodes of resting state
pouch cells. We show evidence for the cathode lithium distribution
to follow the areas of high current densities, which is a surprising
result, given that the cathode generally has very high conductivity.
Furthermore, equalization of the lithiation levels is a slow process
happening over several days. Such observations of structural varieties
and solid-state ion transport are possible in any material with pronounced
intercalation-dependent magnetic properties. The methodology described
in this work is a powerful tool for the analysis of kinetic phenomena
in a wide range of pouch cells
The Sodium Ions Inside a Lipophilic G-Quadruplex Channel as Probed by Solid-State <sup>23</sup>Na NMR
We report solid-state 23Na NMR and X-ray crystallographic results for a self-assembled G-quadruplex channel formed by a guanine nucleoside, 5‘-tert-butyl-dimethylsilyl-2‘,3‘-O-isopropylidene guanosine (G 1). The study provides an unambiguous 23Na NMR identification for the Na+ ions inside a lipophilic G-quadruplex channel. The crystalline nature of the sample yields a remarkably high resolution in the 23Na multiple-quantum magic-angle spinning (MQMAS) spectrum, making it possible to extract very accurate 23Na NMR parameters for each of the three crystallographically distinct Na sites. The observation of a single Na+ ion from a 9-kDa system demonstrates the potential of solid-state 23Na NMR as a complementary technique to X-ray for detecting Na+ ions in biological structures
The Sodium Ions Inside a Lipophilic G-Quadruplex Channel as Probed by Solid-State <sup>23</sup>Na NMR
We report solid-state 23Na NMR and X-ray crystallographic results for a self-assembled G-quadruplex channel formed by a guanine nucleoside, 5‘-tert-butyl-dimethylsilyl-2‘,3‘-O-isopropylidene guanosine (G 1). The study provides an unambiguous 23Na NMR identification for the Na+ ions inside a lipophilic G-quadruplex channel. The crystalline nature of the sample yields a remarkably high resolution in the 23Na multiple-quantum magic-angle spinning (MQMAS) spectrum, making it possible to extract very accurate 23Na NMR parameters for each of the three crystallographically distinct Na sites. The observation of a single Na+ ion from a 9-kDa system demonstrates the potential of solid-state 23Na NMR as a complementary technique to X-ray for detecting Na+ ions in biological structures
μHigh Resolution-Magic-Angle Spinning NMR Spectroscopy for Metabolic Phenotyping of <i>Caenorhabditis elegans</i>
Analysis of model organisms, such
as the submillimeter-size Caenorhabditis elegans,
plays a central role in understanding
biological functions across species and in characterizing phenotypes
associated with genetic mutations. In recent years, metabolic phenotyping
studies of C. elegans based on 1H high-resolution
magic-angle spinning (HR-MAS) nuclear magnetic resonance (NMR) spectroscopy
have relied on the observation of large populations of nematodes,
requiring labor-intensive sample preparation that considerably limits
high-throughput characterization of C. elegans. In
this work, we open new platforms for metabolic phenotyping of C. elegans mutants. We determine rich metabolic profiles
(31 metabolites identified) from samples of 12 individuals using a 1H NMR microprobe featuring high-resolution magic-angle coil
spinning (HR-MACS), a simple conversion of a standard HR-MAS probe
to μHR-MAS. In addition, we characterize the metabolic variations
between two different strains of C. elegans (wild-type
vs slcf-1 mutant). We also acquire a NMR spectrum
of a single C. elegans worm at 23.5 T. This study
represents the first example of a metabolomic investigation carried
out on a small number of submillimeter-size organisms, demonstrating
the potential of NMR microtechnologies for metabolomics screening
of small model organisms
