Serological and Molecular Investigation of Brucella Species in Dogs in Pakistan

Brucellosis is an important bacterial zoonosis caused by B. abortus and B. melitensis in Pakistan. The status of canine brucellosis caused by B. canis remains obscure. In total, 181 serum samples were collected from stray and working dogs in two different prefectures viz. Faisalabad (n = 87) and Bahawalpur (n = 94). Presence of antibodies against B. canis and B. abortus/B. melitensis was determined using the slow agglutination test (SAT) and ELISA, respectively. Real-time PCR was performed to detect and differentiate Brucella DNA at the species level. In Faisalabad, the serological prevalence was found to be 9.2% (8/87) and 10.3% (9/87) by SAT and ELISA, respectively. Only one of the ELISA positive samples (1.15%) yielded amplification for B. abortus DNA. In Bahawalpur, 63.8% (60/94) samples were found positive by SAT; however, none of the samples was positive by ELISA or by real-time PCR. Location, age (≥1 year) and body condition (weak) were found to be associated with B. canis infection, whereas presence of wounds was found to be associated with B. abortus infection only. These findings point towards a risk of transmission from dog to livestock and humans and vice versa. The study expects to draw the attention of concerned authorities towards infection prevention and animal welfare. This study warrants further epidemiological investigation on brucellosis in pet dogs and their owners. To the best of our knowledge, this is first ever report on B. canis and B. abortus in dogs in Pakistan

Discrimination of Coastal Vegetation and Biomass Using AIS Data

The Airborne Imaging Spectrometer (AIS) was flown over a coastal wetlands region near Lewes, Delaware, adjacent to the Delaware Bay on 16 August 1984. Using the AIS data, it was possible to discriminate between four different types of wetland vegetation canopies: (1) trees; (2) broadleaf herbaceous plants (e.g., Acnida cannabina, Hisbiscus moscheutos); (3) the low marsh grass Spartina alterniflora; and (4) the high marsh grasses Distichlis spicata and Spartina patens. The single most useful region of the spectrum was that between 1.40 and 1.90 microns, where slopes of portions of the radiance curve and ratios of radiance at particular wavelengths were significantly different for the four canopy types. The ratio between the highest digital number in the 1.40 to 1.90 microns and .84 to .94 microns regions and a similar ratio between the peaks in radiance in the 1.12 to 1.40 microns and .84 to .94 microns spectral regions were also very effective at discriminating between vegetation types. Differences in radiance values at various wavelengths between samples of the same vegetation type could potentially be used to estimate biomass

Insect (Arthropoda: Insecta) Composition in the Diet of Ornate Box Turtles (Terrapene ornata ornata) in Two Western Illinois Sand Prairies, with a New State Record for Cyclocephala (Coleoptera: Scarabaeidae)

A study of fecal samples collected over a two-year period from juvenile ornate box turtles (Terrapene ornata ornata Agassiz) revealed diets consisting of six orders of insects representing 19 families. Turtles were reared in captivity from eggs harvested from local, wild populations, and released at two remnant prairies. Identifiable insect fragments were found in 94% of samples in 2013 (n=33) and 96% in 2014 (n=25). Frequency of occurrence of insects in turtle feces is similar to results reported in previous studies of midwestern Terrapene species. A comparison of insect composition presented no significant difference between release sites. There is no significant difference in consumed insect species between turtles released into or outside of a fenced enclosure at the same site. Specimens of Cyclocephala longula LeConte collected during this study represent a new state record for Illinois

A portable device for nucleic acid quantification powered by sunlight, a flame or electricity.

A decentralized approach to diagnostics can decrease the time to treatment of infectious diseases in resource-limited settings. Yet most modern diagnostic tools require stable electricity and are not portable. Here, we describe a portable device for isothermal nucleic-acid quantification that can operate with power from electricity, sunlight or a flame, and that can store heat from intermittent energy sources, for operation when electrical power is not available or reliable. We deployed the device in two Ugandan health clinics, where it successfully operated through multiple power outages, with equivalent performance when powered via sunlight or electricity. A direct comparison between the portable device and commercial qPCR (quantitative polymerase chain reaction) machines for samples from 71 Ugandan patients (29 of which were tested in Uganda) for the presence of Kaposi's sarcoma-associated herpesvirus DNA showed 94% agreement, with the four discordant samples having the lowest concentration of the herpesvirus DNA. The device's flexibility in power supply provides a needed solution for on-field diagnostics

Source identification and quantification of particulate matter emitted from livestock houses

There is need to identify and quantify the contribution of different sources to airborne particulate matter (PM) emissions from animal houses. To this end, we compared the chemical and morphological characteristics of fine and coarse PM from known sources collected from animal houses with the characteristics of on-farm fine and coarse airborne PM using two methods: classification rules based on decision trees and multiple linear regression. Fourteen different farms corresponding to seven different housing systems for poultry and pigs were sampled during winter. A total of 28 fine and 28 coarse on-farm airborne PM samples were collected, together with a representative sample of each known source per farm (56 known source samples in total). Source contributions were calculated as relative percentage contributions in particle numbers and then estimated in particle mass. Based on particle numbers, results showed that in poultry houses, most on-farm airborne PM originated from feathers (ranging from 4% to 43% in fine PM and from 6% to 35% in coarse PM) and manure (ranging from 9% to 85% in fine PM and from 30% to 94% in coarse PM). For pigs, most on-farm airborne PM originated from manure (ranging from 70% to 98% in fine PM and from 41% to 94% in coarse PM). Based on particle mass, for poultry most on-farm airborne PM still originated from feathers and manure; for pigs, however, most PM originated from skin and manure. Feed had a negligible contribution to on-farm airborne PM compared with other sources. Results presented in this study improve the understanding of sources of PM in different animal housing systems, which may be valuable when choosing optimal PM reduction technique

Specificity and sensitivity evaluation of novel and existing Bacteroidales and Bifidobacteria-specific PCR assays on feces and sewage samples and their application for microbial source tracking in Ireland

Three novel ruminant-specific PCR assays, an existing ruminant-specific PCR assay and five existing human-specific PCR assays, which target 16S rDNA from Bacteroidales or Bifidobacteria, were evaluated. The assays were tested on DNA extracted from ruminant (n = 74), human (n = 59) and non-ruminant animal (n = 44) sewage/fecal samples collected in Ireland. The three novel PCR assays compared favourably to the existing ruminant-specific assay, exhibiting sensitivities of 91 - 100% and specificities of 95 - 100% as compared to a sensitivity of 95% and specificity of 94%, for the existing ruminant-specific assay. Of the five human-specific PCR assays, the assay targeting the Bifidobacterium catenulatum group was the most promising, exhibiting a sensitivity of 100% (with human sewage samples) and a specificity of 87%. When tested on rural water samples that were naturally contaminated by ruminant feces, the three novel PCR assays tested positive with a much greater percentage (52 - 87%) of samples than the existing ruminant-specific assay (17%). These novel ruminant-specific assays show promise for microbial source tracking and merit further field testing and specificity evaluation.ERTD

RT-PCR Analysis of TOPBP1 Gene Expression in Hereditary Breast Cancer

Hereditary predisposition to breast cancer determined in large part by loss of function mutations in one of two genes BRCA1 and BRCA2. Besides BRCA1 and BRCA2 other genes are also likely to be involved in hereditary predisposition to breast cancer. TopBP1 protein is involved in DNA replication, DNA damage checkpoint response and transcriptional regulation. Expression of TopBP1 gene at the mRNA level was analyzed by semiquantitative reverse transcription-polymerase chain reaction (RT-PCR) in 94 samples of hereditary breast cancer. Analysis of TopBP1 mRNA level showed that expression of TopBP1 is significantly downregulated in poorly differentiated breast cancer (grade III according Bloom-Richardson system (P<0.05)

Prevalence of childhood abuse among people who are homeless in Western countries: a systematic review and meta-analysis

Purpose: This article systematically reviews studies of prevalence of childhood experience of physical and sexual abuse in adult people who are homeless in Western countries. Methods: Medline, PsychInfo, and the Cochrane Library were searched using the keywords: homeless*, child* abuse, child* trauma, and child* adversity and the bibliographies of identified articles were reviewed. Sources of heterogeneity in the prevalence rates were explored by meta-regression analysis Results: Twenty-four reports published between January 1990 and August 2013 in three countries provided estimates obtained from up to 9,730 adult individuals who were homeless. Prevalence of reported childhood physical abuse ranged from 6 to 94% with average prevalence of 37%, 95% CI [25, 51]. Reported sexual abuse ranged from 4 to 62%, with average prevalence estimated as 32%, 95% CI [23, 44] for females and 10% for males, 95% CI [6, 17]. Substantial heterogeneity was observed among the studies (I2 ≥ 98%). Including moderators greatly reduced but did not eliminate this heterogeneity. Moderator analyses suggested that reported physical abuse tended to be higher for predominately white samples and tended to be lower for younger samples. Sexual abuse was far more prevalent in predominately female samples and slightly higher in non-US samples and convenience samples