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Workflow of FamSeq.
Abstract
<p>We use a pedigree file and a file that includes the likelihood () as the input to estimate the posterior probability () for each variant genotype. (E-S: Elston-Stewart algorithm; BN: Bayesian network method; BN-GPU: The computer needs a GPU card installed to run the GPU version of the Bayesian network method; MCMC: Markov chain Monte Carlo method; VCF: variant call format.)</p- Image
- Figure
- Biological Sciences
- Markov chain Monte Carlo algorithm
- pedigree sequencing data
- FamSeq
- graphics processing unit
- pedigree information
- Graphics Processing Units
- variant
- Bayesian network method
- NVIDIA graphics processing unit
- genome sequencing data
- loop
- graphics processing unit version
- Bayesian network algorithm