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Detailed view of the predictions of intrinsic nucleosome organization along GAL1-10 locus (Chromosome II: 276930-279990) and comparison to Segal's and Yuan's results.
Abstract
<p>The first top two line are nucleosome occupancy profile predicted by our model and Segal's. The black boxes in the third, fourth and fifth line are the identified nucleosome positions in this study, Yuan (N-score) <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0109395#pone.0109395-Yuan2" target="_blank">[6]</a> and Segal et al. <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0109395#pone.0109395-Segal1" target="_blank">[5]</a>, respectively.</p- Image
- Figure
- Biological Sciences
- auc
- eukaryotic chromatin structure
- peak detection model
- genome sequence
- S.cerevisiae genome
- gene expression
- Nucleosome Positioning
- Tsallis entropy
- trimeric motifs
- transcription factors
- nucleosome occupancy profile
- information model
- DNA duplex
- support vector machine
- Geometrically Transformed Tsallis Entropy
- nucleosome organizations
- DNA sequence
Similar works
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Last time updated on 12/02/2018
This paper was published in The Francis Crick Institute.
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