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The average nucleosome occupancy predicted by our model compared with some experimental results for a typical 20,000-bp-long genomic region.
Abstract
<p>The top line represents the average nucleosome occupancy predictions from our model. The second graph represents the experimental map in vitro. The third, fourth and fifth graphs represent in vivo experimental maps for three growth conditions (YPD, galactose and ethanol), respectively.</p- Image
- Figure
- Biological Sciences
- auc
- eukaryotic chromatin structure
- peak detection model
- genome sequence
- S.cerevisiae genome
- gene expression
- Nucleosome Positioning
- Tsallis entropy
- trimeric motifs
- transcription factors
- nucleosome occupancy profile
- information model
- DNA duplex
- support vector machine
- Geometrically Transformed Tsallis Entropy
- nucleosome organizations
- DNA sequence
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Last time updated on 12/02/2018
This paper was published in The Francis Crick Institute.
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