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CaGrid Workflow Toolkit: A taverna based workflow tool for cancer grid

By Wei Tan, Ravi Madduri, Alexandra Nenadic, Stian Soiland-Reyes, Dinanath Sulakhe, Ian Foster and Carole A Goble
Topics: Software
Publisher: BioMed Central
OAI identifier: oai:pubmedcentral.nih.gov:3098092
Provided by: PubMed Central

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  1. A: The Triana Workflow Environment: Architecture and Applications. In Workflows for E-science: Scientific Workflows for Grids. Edited by: Taylor IJ, Deelman
  2. (2002). al: Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning.
  3. (2010). C: CDK-Taverna: an open workflow environment for cheminformatics. Bmc Bioinformatics
  4. (2006). Cancer Informatics Vision: caBIG. Cancer Informatics
  5. (2006). Childers L: Globus Toolkit 4: Programming Java Services
  6. (2008). Combining the Power of Taverna and caGrid: Scientific Workflows that Enable Web-Scale Collaboration.
  7. (2010). Composition as a Service.
  8. (2006). Covitz P: caGrid: design and implementation of the core architecture of the cancer biomedical informatics grid. Bioinformatics
  9. (2009). Data submission and curation for caArray, a standard based microarray data repository system.
  10. (2010). et al: BioCatalogue: a universal catalogue of web services for the life sciences. Nucl Acids Res
  11. (2008). et al: e-Science, caGrid, and Translational Biomedical Research. Computer
  12. (2008). et al: Performing statistical analyses on quantitative data in Taverna workflows: An example using R and maxdBrowse to identify differentially-expressed genes from microarray data. Bmc Bioinformatics
  13. (2006). et al: Taverna: lessons in creating a workflow environment for the life sciences. Concurrency and Computation: Practice & Experience
  14. (2006). Globus Toolkit Version 4: Software for Service-Oriented Systems.
  15. Invoke caGrid FQP securely and use credential delegation.
  16. (2008). Lazowska E: Trident: Scientific Workflow Workbench for Oceanography.
  17. (2010). Lymphoma Type Prediction Workflow. [http://www. myexperiment.org/workflows/746]. doi:10.1186/1471-2105-11-542 Cite this article as: Tan et al.: CaGrid Workflow Toolkit: A taverna based workflow tool for cancer grid.
  18. (2006). Oinn T: Taverna: a tool for building and running workflows of services. Nucleic acids research
  19. (2005). Pegasus: A framework for mapping complex scientific workflows onto distributed systems. Scientific Programming
  20. Query caArray Data Service and Retrieve files.
  21. (2007). Reliable, Loosely Coupled Parallel Computation.
  22. (2006). Scientific Workflow Management and the Kepler System. Concurrency and Computation: Practice & Experience
  23. (2005). Service-Oriented Science.
  24. Sharing Data and Analytical Resources Securely in a Biomedical Research Grid Environment.
  25. (2009). The design and realisation of the Virtual Research Environment for social sharing of workflows. Future Generation Computer Systems
  26. (2005). Tuecke S: Modeling and managing State in distributed systems: the role of OGSI and WSRF.
  27. (2003). Tuecke S: Security for Grid Services.