Article thumbnail

Transcriptional activity of transposable elements in maize

By Carlos M Vicient
Topics: Research Article
Publisher: BioMed Central
OAI identifier: oai:pubmedcentral.nih.gov:3091746
Provided by: PubMed Central

To submit an update or takedown request for this paper, please submit an Update/Correction/Removal Request.

Suggested articles

Citations

  1. A combined strategy of ‘’in silico’’ transcriptome analysis and web search engine optimization allows an agile identification of reference genes
  2. (2001). Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome. Genome Res
  3. (1998). Activation of plant retrotransposons under stress conditions. Trends Plant Sci
  4. (2007). AH: A unified classification system for eukaryotic transposable elements. Nature Rev Genet
  5. (2001). AH: Active retrotransposons are a common feature of grass genomes. Plant Physiol
  6. (2005). Analysis and mapping of randomly chosen bacterial artificial chromosome clones from hexaploid bread wheat. Proc Natl Acad Sci USA
  7. (2006). Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution.
  8. (2008). Carareto CM: Transposable elements in Coffea (Gentianales: Rubiacea) transcripts and their role in the origin of protein diversity in flowering plants. Mol Genet Genom
  9. dbEST: database of “Expressed Sequence Tags”.
  10. (2007). Distribution dynamics of the Tnt1 retrotransposon in tobacco. Mol Genet Genom
  11. (2001). Hirochika H: Silencing of transposable elements in plants. Trends Plant Sci
  12. (2003). Hirochika H: Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon rich regions of the genome. Plant Cell
  13. (1998). Hirochika H: Transcriptional activation of the tobacco retrotransposon Tto1 by wounding and methyl jasmonate. Plant Mol Biol
  14. (2009). Identification and validation of reference genes for quantitative RT-PCR normalization in wheat.
  15. (2007). Itoh T: Birth and death of genes promoted by transposable elements in Oryza sativa. Gene
  16. (2007). Kakutani T: Control of FWA gene silencing in Arabidopsis thaliana by SINE-related direct repeats. Plant J
  17. (2007). Noncoding RNAs and gene silencing. Cell
  18. (2009). Panaud O: Identification of an active LTR retrotransposon in rice.
  19. (1998). PC: Xa21D encodes a receptorlike molecule with a leucine-rich repeat domain that determines racespecific recognition and is subject to adaptive evolution. Plant Cell
  20. (2003). Plant LTR-retrotransposons and MITEs: control of transposition and impact on the evolution of plant genes and genomes. Gene
  21. (2008). Schnable PS: Global gene expression analysis of the shoot apical meristem of maize (Zea
  22. (2005). Sluys MA: Transcriptionally active transposable elements in recent hybrid sugarcane. Plant J
  23. (2002). SR: Plant transposable elements: where genetics meets genomics. Nat Genet
  24. (2005). Structure and architecture of the maize genome. Plant Physiol
  25. (1984). The significance of responses of the genome to challenge. Science
  26. (2000). Transposable element contributions to plant genome evolution. Plant Mol Biol
  27. (2008). Wise RP: TEnest: automated chronological annotation and visualization of nested plant transposable elements. Plant Physiol