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Assemble: an interactive graphical tool to analyze and build RNA architectures at the 2D and 3D levels

By Fabrice Jossinet, Thomas E. Ludwig and Eric Westhof

Abstract

Summary: Assemble is an intuitive graphical interface to analyze, manipulate and build complex 3D RNA architectures. It provides several advanced and unique features within the framework of a semi-automated modeling process that can be performed by homology and ab initio with or without electron density maps. Those include the interactive editing of a secondary structure and a searchable, embedded library of annotated tertiary structures. Assemble helps users with performing recurrent and otherwise tedious tasks in structural RNA research

Topics: Applications Note
Publisher: Oxford University Press
OAI identifier: oai:pubmedcentral.nih.gov:2916716
Provided by: PubMed Central

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