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Evolution of AANAT: expansion of the gene family in the cephalochordate amphioxus

By Jiri Pavlicek, Sandrine Sauzet, Laurence Besseau, Steven L Coon, Joan L Weller, Gilles Boeuf, Pascaline Gaildrat, Marina V Omelchenko, Eugene V Koonin, Jack Falcón and David C Klein
Topics: Research article
Publisher: BioMed Central
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Provided by: PubMed Central

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  1. (2001). A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol Biol Evol
  2. (2005). A yeast polyamine acetyltransferase.
  3. (2000). AB: GCN5-related N-acetyltransferases: a structural overview. Annu Rev Biophys Biomol Struct
  4. (2002). An approximately unbiased test of phylogenetic tree selection. Syst Biol
  5. (2002). Aravind L: The role of lineage-specific gene family expansion in the evolution of eukaryotes. Genome Res
  6. (2007). Arylalkylamine N-acetyltransferase: "the Timezyme".
  7. (2001). Biol Chem
  8. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature
  9. (1998). Cole PA: A potent inhibitor of the melatonin rhythm enzyme.
  10. (2008). DC: Evidence that proline focuses movement of the floppy loop of arylalkylamine N-acetyltransferase (EC
  11. (1995). DC: Pineal serotonin N-acetyltransferase: expression cloning and molecular analysis. Science
  12. (1999). DC: Two arylalkylamine Nacetyltransferase genes mediate melatonin synthesis in fish.
  13. (2005). Different versions of the Dayhoff rate matrix. Mol Biol Evol
  14. (2004). Distribution of tyrosine hydroxylase, dopamine, and serotonin in the central nervous system of amphioxus (Branchiostoma lanceolatum): implications for the evolution of catecholamine systems in vertebrates.
  15. (2007). Escriva H: Insights into spawning behavior and development of the European amphioxus (Branchiostoma lanceolatum). J Exp Zool B-Mol Dev Evol
  16. (2004). Escriva H: Preliminary observations on the spawning conditions of the European amphioxus (Branchiostoma lanceolatum) in captivity.
  17. (2006). Evolution of arylalkylamine N-acetyltransferase: emergence and divergenceMol Cell Endocrinol. Mol Cell Endocrinol
  18. (2004). Evolution of cell-cell signaling in animals: did late horizontal gene transfer from bacteria have a role? Trends Genet
  19. (2004). Gothilf Y: Duality of serotonin-N-acetyltransferase in the gilthead seabream (Sparus aurata): molecular cloning and characterization of recombinant enzymes. Gen Comp Endocrinol
  20. (1992). Henikoff JG: Amino acid substitution matrices from protein blocks.
  21. (1996). Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods. Methods Enzymol
  22. (2002). Investigation of the roles of catalytic residues in serotonin N-acetyltransferase.
  23. (2003). JD: Multiple sequence alignment with the Clustal series of programs.
  24. (2005). JS: Structure and functions of the GNAT superfamily of acetyltransferases. Arch Biochem Biophys
  25. (1998). Kinetic analysis of the catalytic mechanism of serotonin N-acetyltransferase (EC
  26. (1997). Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res
  27. (1998). Localization and partial characterization of melatonin receptors in amphioxus, hagfish, lamprey, and skate.
  28. (1995). Melatonin and the Mammalian Pineal Gland. London: Chapman and Hall;
  29. (2006). Melatonin pathway: breaking the 'high-at-night' rule in trout retina. Exp Eye Res
  30. (2000). Melatonin synthesis: arylalkylamine N-acetyltransferases in trout retina and pineal organ are different. Neuroreport
  31. (2000). Modeling amino acid replacement.
  32. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res
  33. (2005). MW: The tree of eukaryotes. Trends Ecol Evol
  34. (1998). ND: Isolation and developmental expression of the amphioxus Pax-6 gene (AmphiPax-6): insights into eye and photoreceptor evolution. Development
  35. ND: Revealing homologies between body parts of distantly related animals by in situ hybridization to developmental genes: Amphioxus vs. vertebrates.
  36. (2004). Nei M: MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Briefings in Bioinformatics
  37. (1999). Ovine arylalkylamine N-acetyltransferase in the pineal and pituitary glands: differences in function and regulation. Endocrinology
  38. (2007). PD: Eleven new putative aminergic G-protein coupled receptors from Amphioxus (Branchiostoma floridae): identification, sequence analysis and phylogenetic relationship. Invert Neurosci
  39. (2000). Plastid genome phylogeny and a model of amino acid substitution for proteins encoded by chloroplast DNA.
  40. (2002). RA: rtREV: an amino acid substitution matrix for inference of retrovirus and reverse transcriptase phylogeny.
  41. (2002). Rambaut A: Inferring confidence sets of possibly misspecified trees.
  42. (2008). Rokhsar DS: The amphioxus genome and the evolution of the chordate karyotype. Nature
  43. SL: Characterization of the Saccharomyces cerevisiae homolog of the melatonin rhythm enzyme arylalkylamine N-acetyltransferase (EC
  44. (1998). SL: Transcripts encoding two melatonin synthesis enzymes in the teleost pineal organ: circadian regulation in pike and zebrafish, but not in trout. Endocrinology
  45. (2004). Strimmer K: TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics.
  46. (2003). temporal and developmental differences between melatonin rhythm generating systems in the teleost fish pineal organ and retina.
  47. (1997). The melatonin rhythm-generating enzyme: molecular regulation of serotonin N-acetyltransferase in the pineal gland. Recent Prog Horm Res
  48. (1992). The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci
  49. (2003). Tillier ER: A transition probability model for amino acid substitutions from blocks.
  50. (1996). TreeView: an application to display phylogenetic trees on personal computers.
  51. (2008). Wicht y: Nocturnal behavior and rhythmic period gene expression in a lancelet, Branchiostoma lanceolatum.