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Biomolecular network motif counting and discovery by color coding

By Noga Alon, Phuong Dao, Iman Hajirasouliha, Fereydoun Hormozdiari and S. Cenk Sahinalp

Abstract

Protein–protein interaction (PPI) networks of many organisms share global topological features such as degree distribution, k-hop reachability, betweenness and closeness. Yet, some of these networks can differ significantly from the others in terms of local structures: e.g. the number of specific network motifs can vary significantly among PPI networks

Topics: Ismb 2008 Conference Proceedings 19–23 July 2008, Toronto
Publisher: Oxford University Press
OAI identifier: oai:pubmedcentral.nih.gov:2718641
Provided by: PubMed Central

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