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The variational explicit polarization potential and analytical first derivative of energy: Towards a next generation force field

By Wangshen Xie, Lingchun Song, Donald G. Truhlar and Jiali Gao

Abstract

A previous article proposed an electronic structure-based polarizable potential, called the explicit polarization (X-POL) potential, to treat many-body polarization and charge delocalization effects in polypeptides. Here, we present a variational version of the X-POL potential, in which the wave function of the entire molecular system is variationally optimized to yield the minimum total electronic energy. This allows the calculation of analytic gradients, a necessity for efficient molecular dynamics simulations. In this paper, the detailed derivations of the Fock matrix and analytic force are presented and discussed. The calculations involve a double self-consistent-field procedure in which the wave function of each fragment is self-consistently optimized in the presence of other fragments, and in addition the polarization of the entire system is self-consistently optimized. The variational X-POL potential has been implemented in the Chemistry at Harvard Molecular Mechanics (CHARMM) package and tested successfully for small model compounds

Topics: Theoretical Methods and Algorithms
Publisher: American Institute of Physics
OAI identifier: oai:pubmedcentral.nih.gov:2671662
Provided by: PubMed Central
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