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One ancestor for two codes viewed from the perspective of two complementary modes of tRNA aminoacylation

By Andrei S Rodin, Eörs Szathmáry and Sergei N Rodin
Topics: Research
Publisher: BioMed Central
OAI identifier: oai:pubmedcentral.nih.gov:2669802
Provided by: PubMed Central
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    Citations

    1. (1988). A simple structural feature is a major determinant of the identity of a transfer RNA. Nature
    2. (1989). A: Modern metabolism as a palimpsest of the RNA world.
    3. (1993). A: On concerted origin of transfer RNAs with complementary anticodons.
    4. (1993). A: Transfer RNAs with complementary anticodons: Could they reflect early evolution of discriminative genetic code adaptors? P r o c N a t l A c a d S c i U S A
    5. (1998). AD: A novel glutamine-RNA interaction identified by screening libraries in mammalian cells.
    6. (1994). AM: Phylogeny from function: Evidence from the molecular fossil record that tRNA originated in replication, not translation.
    7. Aminoacyl tRNA synthetases: from the RNA world to the theater of proteins.
    8. (1995). Aminoacyl-RNA synthesis catalyzed by an RNA.
    9. (2001). Aminoacyl-tRNA synthetases: potential markers of genetic code development. Trends Biochem Sci
    10. (2007). An asymmetric underlying rule in the assignment of codons: possible clue to a quick early evolution of the genetic code via successive binary choices. RNA
    11. (1979). Bronskill PM: Inadequacy of prebiotic synthesis as origin of proteinous amino acids.
    12. (1988). C: The second genetic code.
    13. (2007). Carter CW Jr: A minimal Trp RS catalytic domain supports sense/antisense ancestry of class I and II aminoacyl-tRNA synthetases. Mol Cell
    14. (1992). Cech TR: Aminoacyl esterase activity of the Tetrahymena ribozyme. Science
    15. (1993). Coding coenzyme handles: A hypothesis for the origin of the genetic code.
    16. (2007). Coevolution of metabolic networks and membranes: the scenario of progressive sequestration.
    17. (1993). Cognition, mechanism, and evolutionary relationships in aminoacyl-tRNA synthetases. Annu Rev Biochem
    18. Comments on the search for the source of the genetic code.
    19. (2002). Duax WL: Did tRNA synthetase classes arise on opposite strands of the same gene? Mol Cell
    20. (2007). E-D: A present-day aminoacyltRNA synthetase with ancestral editing properties. RNA
    21. (1999). Early evolution: prokaryotes, the new kids on the block. Bioessays
    22. (2005). Error minimization and coding triplet/binding site associations are independent features of the canonical genetic code.
    23. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol
    24. (1968). Evolution of the genetic apparatus.
    25. (2001). Genome trees constructed using five different approaches suggest new major bacterial clades.
    26. (1990). GMC: Transfer RNAs for primordial amino acids contain remnants of a primitive code at position 3 to 5. Biochimie
    27. (1992). Groundworks for an evolutionary biochemistry: the iron-sulphur world. Prog Biophys Mol Biol
    28. (1979). Hypercycle: A principle of natural self-organization.
    29. (2008). JL: he Miller volcanic spark discharge experiment. Science
    30. (2008). Jr: Whence the genetic code? Thawing the "frozen accident". Heredity
    31. (1998). LD: he genetic code is one in a million.
    32. (1987). Maizels N: TRNA-like structures tag the 3' ends of genomic RNA molecules for replication: Implications for the origin of protein synthesis.
    33. (1985). Mirrop S: tRNA-rRNA sequence homologies: Evidence for an ancient modular format shared by tRNAs and rRNAs. Biosystems
    34. (1982). Molecular basis for the genetic code.
    35. (1997). Ohno S: Four primordial modes of tRNA-synthetase recognition, determined by the (G,C) operational code.
    36. (1996). Ohno S: The presence of codon-anticodon pairs in the acceptor stem of tRNAs.
    37. (1965). On the evolution of the genetic code.
    38. On the origin of the genetic code before translation.
    39. (2008). On the origin of the genetic code: signatures of its primordial complementarity in tRNAs and aminoacyl-tRNA syntheatses. Heredity
    40. (1992). On the origin of the transfer RNA molecule.
    41. (2007). On the origin of the translation system and the genetic code in the RNA world by means of natural selection, exaptation, and subfunctionalization. Biol Direct
    42. (1996). Origin of genetic code: A needle in the haystack of tRNA sequences.
    43. (2006). Origin of the genetic code: First aminoacyltRNA synthetases could replace isofunctional ribozymes when only the second base of codons was established.
    44. (2005). Origins of the genetic code: The escaped triplet theory. Annu Rev Biochem
    45. (1976). Pieczenik G: A speculation on the origin of protein synthesis. Orig Life
    46. (1988). Primitive ancestry of transfer RNA.
    47. (1997). Rewriting the keyboard: evolvability of the genetic code. Nature Rev Genet 2001, 2:49-58. 9 . I b b a M , M o r g a n S , C u r n o w A W , P r i d m o r e D R , V o t h k n e c h t U
    48. (2000). Ribozyme-catalyzed tRNA aminoacylation. Nat Struct Biol
    49. (2006). Rodin AS: Partitioning of aminoacyl-tRNA synthetases in two classes could have been encoded in a strandsymmetric RNA world.
    50. (2007). Rodin SN: Translation of both complementary strands might govern early evolution of the genetic code.
    51. (1993). S: An operational RNA code for amino acids and possible relation to genetic code.
    52. (2007). Sekine Y: Permuted tRNA genes expressed via a circular RNA intermediate in Cyanidioschyzon merolae. Science
    53. (2003). Söll D: Activation of the pyrrolysine suppressor tRNA requires formation of a tertiary complex with class I and class II lysil-tRNA synthetases. Mol Cell
    54. (2004). Söll D: Aminoacyl-tRNAs: setting the limits of the genetic code. Genes Dev
    55. (2005). Söll D: Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5'- and 3'-halves. Nature
    56. (2001). Söll D: The renaissance of aminoacyl-tRNA synthesis. EMBO reports
    57. (1969). Specific selective interaction between amino acid groups of polypeptide chains. Biofizika
    58. Szathmary E: Catalytic propensity of amino acids and the origins of the genetic code and proteins.
    59. (1995). Szathmáry E: The major transition in evolution.
    60. (1995). TH: On codon reassignment.
    61. (2005). The complete set of tRNA species in Nanoarchaeum equitans.
    62. (1999). The genomic tag hypothesis: modern viruses as molecular fossils of ancient strategies for genomic replication, and clues regarding the origin of protein synthesis.
    63. The maintenance of the accuracy of protein synthesis and its relevance to ageing.
    64. (1987). The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol
    65. (1999). The origin of the genetic code: amino acids as cofactors in an RNA world. Trends Genet
    66. (1968). The origin of the genetic code.
    67. (2005). Theory of early molecular evolution: predictions and confirmations.
    68. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool
    69. (2001). tRNAs in the spotlight during protein biosynthesis. Trends Biochem Sci
    70. (2001). Two classes of tRNA synthetases suggested by sterically compatible dockings on tRNA acceptor stem. Cell
    71. (1995). Two types of aminoacyl-tRNA synthetases could be originally encoded by complementary strands of the same nucleic acid. Origins Life Evol Biosphere
    72. (2005). Vassilenko KS: Compilation of tRNA sequences and sequences of tRNA genes. Nucl Acids Res
    73. (1989). von Haeseler A: How old is the genetic code? Statistical geometry of tRNA provides an answer. Science

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