Skip to main content
Article thumbnail
Location of Repository

CNV-seq, a new method to detect copy number variation using high-throughput sequencing

By Chao Xie and Martti T Tammi
Topics: Methodology Article
Publisher: BioMed Central
OAI identifier: oai:pubmedcentral.nih.gov:2667514
Provided by: PubMed Central

Suggested articles

Citations

  1. (2004). An overview of Ensembl. Genome Res
  2. (2003). B: Correcting errors in shotgun sequences.
  3. (2007). B: Genome-wide mapping of in vivo protein-DNA interactions. Science
  4. (2002). BLAT-the BLAST-like alignment tool. Genome Res
  5. (2008). Core Team: R: A Language and Environment for Statistical Computing
  6. (1975). Coulson AR: A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase.
  7. (2004). Detection of large-scale variation in the human genome. Nat Genet
  8. (1998). DG: High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat Genet
  9. (2008). DJ: A large genome center's improvements to the Illumina sequencing system. Nat Methods
  10. (2008). Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution. Nature
  11. (2006). Global variation in copy number in the human genome. Nature
  12. (1975). Gressis N: A note on the ratio of two normally distributed variables. Manage Sci
  13. (2007). JC: The diploid genome sequence of an individual human. PLoS Biol
  14. (2005). JM: Genome sequencing in microfabricated high-density picolitre reactors. Nature
  15. (2004). Large-scale copy number polymorphism in the human genome. Science
  16. (2008). Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods
  17. (1997). Matrix-based comparative genomic hybridization: biochips to screen for genomic imbalances. Genes Chromosomes Cancer
  18. (2007). Methods and applications in DNA sequence alignments.
  19. (2007). Methods and strategies for analyzing copy number variation using DNA microarrays. Nat Genet
  20. (2008). Next-generation sequencing transforms today's biology. Nat Methods
  21. (1969). On the ratio of two correlated normal random variables. Biometrika
  22. (2008). Ropers HH: Mapping translocation breakpoints by next-generation sequencing. Genome Res
  23. (2008). Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning. Nature
  24. (2008). SM: A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning. Genome Res
  25. (2008). Sonstegard TS: SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries. Nat Methods
  26. (2008). The beginning of the end for microarrays? Nat Methods
  27. (2008). The complete genome of an individual by massively parallel DNA sequencing. Nature
  28. (2008). The transcriptional landscape of the yeast genome defined by RNA sequencing. Science
  29. (2006). Whole-genome re-sequencing. Curr Opin Genet Dev
  30. (2008). Whole-genome sequencing and variant discovery in C. elegans. Nat Methods
  31. (2008). Y: RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays. Genome Res
  32. (2008). Yaschenko E: Database resources of the National Center for Biotechnology Information. Nucleic Acids Res

To submit an update or takedown request for this paper, please submit an Update/Correction/Removal Request.