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EST based phylogenomics of Syndermata questions monophyly of Eurotatoria

By Alexander Witek, Holger Herlyn, Achim Meyer, Louis Boell, Gregor Bucher and Thomas Hankeln
Topics: Research Article
Publisher: BioMed Central
OAI identifier: oai:pubmedcentral.nih.gov:2654452
Provided by: PubMed Central

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Citations

  1. (1996). A cladistic analysis of pseudocoelomate (aschelminth) morphology. Invertebrate Biology
  2. (2002). Acanthocephalan phylogeny and the evolution of parasitism. Integrative and Comparative Biology
  3. (1995). Animal Evolution.
  4. Annotated checklist of the rotifers (Phylum Rotifera), with notes on nomenclature, taxonomy and distribution.
  5. (2006). AP: Dense taxonomic EST sampling and its applications for molecular systematics of the Coleoptera (beetles). Mol Biol Evol
  6. (1998). Are lemnisci and proboscis present in Bdelloidea? Hydrobiologia
  7. (2008). Arkhipova IR: Massive horizontal gene transfer in bdelloid rotifers. Science
  8. (2007). Available from Munich, distributed by the author at http://www.treefinder.de
  9. (1998). Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res
  10. (2008). Broad phylogenomic sampling improves resolution of the animal tree of life. Nature
  11. (2004). Casane D: Phylogenomics of eukaryotes: impact of missing data on large alignments. Mol Biol Evol
  12. (1989). Colburn RA: Phylogenetic-Relationships within Phylum Rotifera – Orders and Genus Notholca. Hydrobiologia
  13. (2000). DB: Evidence from a protein-coding gene that acanthocephalans are rotifers. Invertebrate Biology
  14. (1997). Deerfield DWI: GeneDoc: Analysis and Visualization of Genetic Variation. EMBNEWNEWS
  15. (2001). Ehlers U: Organisation of the praesoma in Acanthocephalus anguillae (Acanthocephala, Palaeacanthocephala) with special reference to the muscular system. Zoomorphology
  16. (1997). Ehlers U: Ultrastructure and function of the pharynx of Gnathostomula paradoxa (Gnathostomulida). Zoomorphology
  17. (1997). Epidermal ultrastructure of Seison nebaliae and Seison annulatus, and a comparison of epidermal structures within the Gnathifera. Zoomorphology
  18. (2008). Fisse F: Phylogenetic position of Nemertea derived from phylogenomic data. Mol Biol Evol
  19. (2003). Gascuel O: A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol
  20. (2004). GeneWise and Genomewise. Genome Res
  21. (2006). Giribet G: A modern approach to rotiferan phylogeny: Combining morphological and molecular data. Mol Phylogenet Evol
  22. (2000). Host-parasite interactions in acanthocephala: a morphological approach.
  23. (2004). Investigations into the phylogenetic position of Micrognathozoa using four molecular loci.
  24. (2000). Laclette JP: Phylogenetic relationships of Acanthocephala based on analysis of 18S ribosomal RNA gene sequences.
  25. (2006). Lartillot N: A Bayesian compound stochastic process for modeling nonstationary and nonhomogeneous sequence evolution. Mol Biol Evol
  26. (2003). Loss and recovery of wings in stick insects. Nature
  27. (1996). Molecular evidence for Acanthocephala as a subtaxon of Rotifera.
  28. (2005). On a new Seison Grube, 1861 from coastal waters of Kenya, with a reappraisal of the classification of the Seisonida (Rotifera). Zoological Studies
  29. (2000). On the phylogeny of the Metazoa in the light of Cycliophora and Micrognathozoa. Zoologischer Anzeiger
  30. (2004). Philippe H: A Bayesian mixture model for acrosssite heterogeneities in the amino-acid replacement process. Mol Biol Evol
  31. Phylogenetic aspects of pseudocoelomate evolution. In The origins and relationships of lower invertebrates Edited by: Conway
  32. (2006). Phylogenetic relationships among Syndermata inferred from nuclear and mitochondrial gene sequences. Mol Phylogenet Evol
  33. (2005). ProtTest: selection of best-fit models of protein evolution. Bioinformatics
  34. (2002). RA: rtREV: an amino acid substitution matrix for inference of retrovirus and reverse transcriptase phylogeny.
  35. (2002). Rambaut A: Inferring confidence sets of possibly misspecified gene trees.
  36. (1998). RL: Phylogenetic relationsships of phylum Rotifera with emphasis on the families of Bdelloidea. Hydrobiologia
  37. (2004). S: SMART amplification combined with cDNA size fractionation in order to obtain large full-length clones.
  38. (1998). SA: Phylogenetic relationships of the Acanthocephala inferred from 18S ribosomal DNA sequences. Mol Phylogenet Evol
  39. (1998). SA: The evolutionary relationships of rotifers and acanthocephalans. Hydrobiologia
  40. (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol
  41. (1998). Spermatogenesis and ultrastructure of the spermatozoa of Seison nebaliae (Syndermata). Zoomorphology
  42. (1996). Spezielle Zoologie, Teil 1. Einzeller und wirbellose Tiere.
  43. (2007). Spiralian phylogenomics supports the resurrection of Bryozoa comprising Ectoprocta and Entoprocta. Mol Biol Evol
  44. (2003). Stability in phylogenetic formulations and its relationship to nodal support. Systematic Biology
  45. (2004). Strimmer K: TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics. Bmc Evolutionary Biology
  46. (2001). The interrelationships of metazoan parasites: a review of phylum- and higher-level hypotheses from recent morphological and molecular phylogenetic analyses. Folia Parasitologica
  47. (2003). The syndermatan phylogeny and the evolution of acanthocephalan endoparasitism as inferred from 18S rDNA sequences. Mol Phylogenet Evol
  48. (1994). TJ: Clustal-W – Improving the Sensitivity of Progressive Multiple Sequence Alignment through Sequence Weighting, Position-Specific Gap Penalties and Weight Matrix Choice. Nucleic Acids Research
  49. (1996). TreeView: an application to display phylogenetic trees on personal computers.
  50. (2003). Ultrastructure and overall organization of ligament sac, uterine bell, uterus and vagina
  51. (1995). Ultrastruktur und Phylogenie von Seison nebaliae (Grube 1859) und Seison annulatus (Claus 1876).
  52. (2008). Vision TJ: Using ESTs for phylogenomics: Can one accurately infer a phylogenetic tree from a gappy alignment? Bmc Evolutionary Biology
  53. (1997). von Haeseler A: Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment. Proc Natl Acad Sci USA
  54. (2002). von Haeseler A: TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics
  55. (2000). WC: Triploblastic relationships with emphasis on the acoelomates and the position of Gnathostomulida, Cycliophora, Plathelminthes, and Chaetognatha: A combined approach of 18S rDNA sequences and morphology. Systematic Biology
  56. (2000). Zur Ultrastruktur, Morphologie und Phylogenie der Acanthocephala.

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