(2004). Aligning multiple genomic sequences with the threaded blockset aligner. Genome research
(1992). Collins FS: Phylogenetic footprinting reveals a nuclear protein which binds to silencer sequences in the human gamma and epsilon globin genes. Mol Cell Biol
(1980). Crick FH: Selfish DNA: the ultimate parasite. Nature
(2003). DL: An endogenous retroviral long terminal repeat is the dominant promoter for human beta1,3-galactosyltransferase 5 in the colon. Proc Natl Acad Sci USA
(2007). DL: Repeated recruitment of LTR retrotransposons as promoters by the anti-apoptotic locus NAIP during mammalian evolution. PLoS Genet
(2006). DL: Transcription of two human genes from a bidirectional endogenous retrovirus promoter. Gene
(1996). DNA sequence insertion and evolutionary variation in gene regulation.
(2003). Eichler EE: Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome. Genome research
(2006). ES: A family of conserved noncoding elements derived from an ancient transposable element. Proc Natl Acad Sci USA
(2006). ES: A large family of ancient repeat elements in the human genome is under strong selection.
(2005). Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. Genome research
(2006). Functional noncoding sequences derived from SINEs in the mammalian genome. Genome research
(2006). Haussler D: A distal enhancer and an ultraconserved exon are derived from a novel retroposon. Nature
(2007). Haussler D: Species-specific endogenous retroviruses shape the transcriptional network of the human tumor suppressor protein p53. Proc Natl Acad Sci USA
(2002). Haussler D: The human genome browser at UCSC. Genome research
(2007). Haussler D: Thousands of human mobile element fragments undergo strong purifying selection near developmental genes.
(2006). IK: Transposable element derived DNaseI-hypersensitive sites in the human genome. Biol Direct
(2005). IK: Transposable elements donate lineage-specific regulatory sequences to host genomes. Cytogenet Genome Res
(2001). Initial sequencing and analysis of the human genome. Nature
(2002). Initial sequencing and comparative analysis of the mouse genome. Nature
(2003). Kondrashovi AS: Conserved fragments of transposable elements in intergenic regions: evidence for widespread recruitment of MIR- and L2-derived sequences within the mouse and human genomes. Genet Res
(2003). Koonin EV: Origin of a substantial fraction of human regulatory sequences from transposable elements. Trends Genet