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DetectiV: visualization, normalization and significance testing for pathogen-detection microarray data

By Michael Watson, Juliet Dukes, Abu-Bakr Abu-Median, Donald P King and Paul Britton


DetectiV is a tool for analyzing pathogen-detection microarray datasets that allows simple visualisation, normalisation and significance testing

Topics: Software
Publisher: BioMed Central
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Provided by: PubMed Central

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  10. (2005). NCBI GEO: mining millions of expression profiles - database and tools. Nucleic Acids Res
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  12. (2000). Rapp BA: Database resources of the National Center for Biotechnology Information. Nucleic Acids Res
  13. (2004). Rasooly A: Multipathogen oligonucleotide microarray for environmental and biodefense applications. Biosens Bioelectron
  14. (2005). Silman NJ: Development of a multi-pathogen oligonucleotide microarray for detection of Bacillus anthracis. Mol Cell Probes
  15. (2002). Sokunova E, Zasedatelev A, et al.: Specieslevel identification of orthopoxviruses with an oligonucleotide microchip.
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