Location of Repository

Gene order data from a model amphibian (Ambystoma): new perspectives on vertebrate genome structure and evolution

By Jeramiah J Smith and S Randal Voss
Topics: Research Article
Publisher: BioMed Central
OAI identifier: oai:pubmedcentral.nih.gov:1560138
Provided by: PubMed Central
Download PDF:
Sorry, we are unable to provide the full text but you may find it at the following location(s):
  • http://www.pubmedcentral.nih.g... (external link)
  • Suggested articles



    1. (1967). A: The Advances Theory of Statistics: inference and relationship Volume 2.
    2. (1991). Analysis of Human Genetic Linkage 3rd edition.
    3. (2002). BLAT – The BLAST-like alignment tool. Genome Res
    4. (2004). CH: Chromosomes of the tuatara, Sphenodon, a chromosome heteromorphism and an archaic reptilian karyotype. Cytogenet Genome Res
    5. (1998). Characterization of whole genome radiation hybrid mapping resources for nonmammalian vertebrates. Nucleic Acids Res
    6. (1975). Chromosome evolution in the caudate Amphibia. Evol Biol
    7. (2005). Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages. Genome Res
    8. (2002). Developmental basis of limb evolution.
    9. (1980). Do the chromosomes of the kiwi provide evidence for a monophyletic origin of the ratites? Nature
    10. (2002). DW: Comparative mapping of Z-orthologous genes in vertebrates: implications for the evolution of avian sex chromosomes. Cytogenet Genome Res
    11. (2003). Eizirik E, O'Brien SJ: Placental mammal diversification and the Cretaceous-Tertiary boundary.
    12. (1999). et al.: 300 million years of conserved synteny between chicken Z and human chromosome 9. Nat Genet
    13. (2004). et al.: Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature
    14. (2000). First report on chicken genes and chromosomes 2000. Cytogenet Cell Genet
    15. (1994). Fishes of the world 3rd edition.
    16. (2006). Flajnik MF: Ancestral organization if the MHC revealed in the amphibian Xenopus.
    17. (2004). From biomedicine to natural history research: EST resources for ambystomatid salamanders. BMC Genomics
    18. Genetic Map of Xenopus tropicalis [http://tropmap.biol ogy.uh.edu]
    19. (2005). Genome Sequencing Consortium (ICGSC): Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature
    20. (2001). Genome Sequencing Consortium (IHGSC): initial sequencing and analysis of the human genome. Nature
    21. (1999). Graves JAM: Comparative painting reveals strong chromosome homology over 80 million years of bird evolution. Chromosome Res
    22. (2004). H: A medaka gene map: the trace of ancestral vertebrate protochromosomes revealed by comparative gene mapping. Genome Res
    23. (2006). Hameister H: Reconstruction of a 450-MY-old ancestral vertebrate protokaryotype. Trends Genet
    24. (1998). Hedges B: A molecular timescale for vertebrate evolution. Nature
    25. (2005). Highly conserved linkage homology between birds and turtles: bird and turtle chromosomes are precise counterparts of each other. Chromosome Res
    26. Homo sapiens Genome: Statistics –
    27. (1971). JA: An investigation of the restraints with respect to sample size commonly imposed on the use of the chi-square statistic.
    28. (1958). Jr: Probabilistic interpretations for the mean square contingency.
    29. (1963). Kruskal WH: Measures of association for cross classifications III: approximate sampling theory.
    30. (1954). Kruskal WH: Measures of association for cross classifications.
    31. (1992). L-C: High-resolution mapping of mammalian genes by in situ hybridization to free chromatin.
    32. (1991). Lowcock LA: Genome size and metabolic-rate in salamanders.
    33. (2002). Machray GC: Constructing plant radiation hybrid panels.
    34. (1946). Mathematical Methods of Statistics Princeton:
    35. (2002). Measures of synteny conservation between species pairs. Genetics
    36. (2002). Medaka: a model organism from the Far East. Nat Rev Genet
    37. (2004). Molecular timescales and the fossil record: a paleontological perspective. Trends Genet
    38. (1975). New method for mapping genes in human chromosomes. Nature
    39. (2002). Origin of evolutionary novelty: Examples from limbs.
    40. (1969). Pardue ML: Formation and detection of RNA-DNA hybrid molecules in cytological preparations.
    41. (2001). Parichy DM: Conserved vertebrate chromosome segments in the large salamander genome. Genetics
    42. (2003). Quicke DJ: Early tetrapod relationships revisited. Biol Rev Camb Philos Soc
    43. (1990). Radiation hybrid mapping: a somatic cell genetic method for constructing high resolution maps of mammalian chromosomes.
    44. (2004). Rat Genome Secuencing Project Consortium (RGSPC): Genome sequence of the Brown Norway Rat yields insights into mammalian evolution. Nature
    45. (2004). Reconstructing the genomic architecture of ancestral mammals: Lesions from human, mouse, and rat genomes. Genome Res
    46. (2003). Reconstruction of the ancestral karyotype of eutherian mammals. Chromosome Res
    47. (2005). Second report on chicken genes and chromosomes 2005. Cytogenet Genome Res
    48. (2002). Sequencing Consortium (MGSC): Initial sequencing and comparative analysis of the mouse genome. Nature
    49. (1967). Sex chromosomes and sex-linked genes.
    50. (2003). SJ: Reconstructing the genomic architecture of mammalian ancestors using multispecies comparative maps. Human Genome
    51. (2005). SR: A comprehensive expressed sequence tag linkage map for tiger salamander and Mexican axolotl: enabling gene mapping and comparative genomics in Ambystoma. Genetics
    52. (1938). Statistical Methods for Research Workers Oliver and Boyd,
    53. (1998). SV: Evolution of vertebrate limbs: Robust morphology and flexible development. Am Zool
    54. (1999). T-box genes and the formation of vertebrate forelimb- and hindlimb specific pattern. Cell Tissue Res
    55. (2000). Talbot WS: Zebrafish comparative genomics and the origins of vertebrate chromosomes. Genome Res
    56. (2005). The DNA sequence of the human X chromosome. Nature
    57. (1999). The dynamics of chromosome evolution in birds and mammals. Nature
    58. (1995). The origin and function of the mammalian Ychromosome and Y-borne genes – an evolving understanding. Bioessays
    59. (1989). The proximity of DNA sequences in interphase cell nuclei is correlated to genomic distance and permits ordering of cosmids spanning 250 kilobase pairs. Genomics
    60. (2003). TJ: Reciprocal chromosome painting among human, aardvark, and elephant (superorder Afrotheria) reveals the likely eutherian ancestral karyotype.
    61. (2003). Vision TJ: Fast identification and statistical evaluation of segmental homologies in comparative maps. Bioinformatics
    62. (2005). Voss SR: Sal-Site: Integrating new and existing ambystomatid salamander research and informational resources.
    63. (2004). Weissenbach JE: Estimation of the extent of synteny between Tetraodon nigroviridis and Homo sapiens genomes.
    64. (2005). WS: The zebrafish gene map defined ancestral vertebrate chromosomes. Genome Res

    To submit an update or takedown request for this paper, please submit an Update/Correction/Removal Request.