This document describes the package ’ddepn’ implementing our proposed network reconstruction algorithm (). Section 1 gives a quick introduction on how to use the package. Section 2 shows how to format the input arguments for the ddepn function. Section 3 gives an overview on how to include prior knowledge on network structures and in section 4 code snippets are given for the possible types of calling ddepn. Finally, in section 5 an example for inference on real data is given
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