Article thumbnail
Location of Repository

Clustered heatmap of proteins with a significantly regulated expression profile in the plasma of <i>Bithynia siamensis goniomphalos</i> snails after infection with <i>Opisthorchis viverrini</i>.

By Kulwadee Suwannatrai (3366119), Apiporn Suwannatrai (3361361), Pairat Tabsripair (3366113), Jariya Umka Welbat (3366116), Sirikachorn Tangkawattana (231139), Cinzia Cantacessi (181516), Jason Mulvenna (32215), Smarn Tesana (273292), Alex Loukas (11035) and Javier Sotillo (134069)

Abstract

<p>The relative expression of plasma proteins at 24, 48 and 96 hpi of infected snails were compared against the control group (uninfected snails). Proteins were grouped into 7 different categories based on GO annotation and clustering was performed using Euclidean distances based on the expression patterns. Color intensity reflects the corresponding log<sub>2</sub> fold change and significant up-regulation shown in red, significant down-regulation is shown in blue, and no statistically significant change in abundance is shown in gray.</p

Topics: Biochemistry, Medicine, Microbiology, Immunology, Infectious Diseases, Virology, Biological Sciences not elsewhere classified, Physical Sciences not elsewhere classified, plasma, viverrini infection, spectra mass spectrometry, Bithynia siamensis goniomphalos Infected, sequential window acquisition, SWATH-MS, hemocyte, PDR, Differential Protein Expression, Opisthorchis viverrini Bithynia siamensis goniomphalos, protein, liver fluke Opisthorchis viverrini, bile duct cancer, Greater Mekong sub-region
Year: 2016
DOI identifier: 10.1371/journal.pntd.0005104.g005
OAI identifier: oai:figshare.com:article/4266515
Provided by: FigShare
Download PDF:
Sorry, we are unable to provide the full text but you may find it at the following location(s):
  • https://figshare.com/articles/... (external link)
  • Suggested articles


    To submit an update or takedown request for this paper, please submit an Update/Correction/Removal Request.