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Low relative humidity triggers RNA-directed de novo DNA\ud methylation and suppression of genes controlling stomatal\ud development

By Penelope Tricker, J.George Gibbings, Carlos M Rodríguez López, Paul Hadley, Mike J. Wilkinson and none

Abstract

Environmental cues influence the development of stomata on the leaf epidermis, and allow plants to exert plasticity\ud in leaf stomatal abundance in response to the prevailing growing conditions. It is reported that Arabidopsis thaliana\ud ‘Landsberg erecta’ plants grown under low relative humidity have a reduced stomatal index and that two genes in\ud the stomatal development pathway, SPEECHLESS and FAMA, become de novo cytosine methylated and\ud transcriptionally repressed. These environmentally-induced epigenetic responses were abolished in mutants lacking\ud the capacity for de novo DNA methylation, for the maintenance of CG methylation, and in mutants for the production\ud of short-interfering non-coding RNAs (siRNAs) in the RNA-directed DNA methylation pathway. Induction of\ud methylation was quantitatively related to the induction of local siRNAs under low relative humidity. Our results\ud indicate the involvement of both transcriptional and post-transcriptional gene suppression at these loci in response\ud to environmental stress. Thus, in a physiologically important pathway, a targeted epigenetic response to a specific\ud environmental stress is reported and several of its molecular, mechanistic components are described, providing\ud a tractable platform for future epigenetics experiments. Our findings suggest epigenetic regulation of stomatal\ud development that allows for anatomical and phenotypic plasticity, and may help to explain at least some of the\ud plant’s resilience to fluctuating relative humidity

Publisher: Oxford University Press
Year: 2012
OAI identifier: oai:centaur.reading.ac.uk:28522

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